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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015818145.1_cds_XP_016499494.1_13414
CDS Infomation

[gene=LOC107818078] [db_xref=GeneID:107818078] [protein=protein SHI RELATED SEQUENCE 1] [protein_id=XP_016499494.1] [location=complement(join(81542..81936,83016..83357,84014..84338))] [gbkey=CDS]
Sequence

ATGGCTAATTTCTTTTCACTAGACGGAAGAGGAAGTAGCAGCCAAGATCAACAGCAAGAA
ATTAGCAGCAGTCACCACCGTACCGTTAACCCAGTACCCACAGAAATCAGTGCAGAGAGT
TGGTTCTTGTACAGAAATGATCATAATCAAGAAATGCCCACTTACAAAGGCTTCGAGCTA
TGGCAAAGTACAACTCCTCAGCATCAACCCGAACAACAACAACAACAACAGTTTCGTCAC
CCAATTTATCCTTTGCAAGATCTTTATTCCACTGCTGTTGGATTAGGTGTAGGGCCCAAC
CAAAGTGGCTTTGACATATTTGCAGGTGATCATGAGGCATCAAGATCGGGGTTTGTGATG
ATGAGGAGTGGAGGAGGTGGAATTAGCTGCCAAGATTGTGGGAACCAAGCTAAGAAAGAT
TGTCAACACATGAGATGTAGGACTTGCTGCAAGAGTAGAGGGTTACAGTGCCAAACTCAT
GTCAAAAGCACTTGGGTTCCAGCCGCTAAACGCAGAGAAAGGCAACAACAACTTTCTGCT
TTGCAGCAACAGGAACGACATGATCAGTTGCACTTAGATCATAATAATAATTATAAACCT
AAAAGGAAAAGAGAGGATCCAAGTGCTTCCGCTCTTGTTTGTGCTCCTTTACCTTCAAAT
ACTAATGGGTTAGAAGTGGGAAAATTTCCAGCAAAAGTAAGTTCAGCTGCCCTATTTCAG
TGCATCCAAATGAGCTCAATTGAGGACGCTGAGGATCAGTTAGCATATCAGGCCGCTGTG
AATATTGGGGGCCACGTGTTCAAAGGAATTCTATATGATCAAGGTCCTGAAAGTCAGTAT
AATAATATGGCTGCAGCCGGTGATACTTCTTCTGGTGGTGGAAGTGGTAGTGCTGGCATT
CCACACCACCATAACTCCGCTGCCACAGCCATCGCAAGCGGCGGTGCTGCAGCGGCAGCG
GAAGCCTCAAATTTTCTTGACCCTTCTTTATTTCCAGCTTCCCTTAGTACTTTCATGTCA
ACTGGTACGCAGTTCTTTCCACCTCCAAGATCTCCTAGATAA

Peptide Sequence

PEP ID

XP_016499494.1
PEP Infomation

PREDICTED: protein SHI RELATED SEQUENCE 1 [Nicotiana tabacum]
Sequence

MANFFSLDGRGSSSQDQQQEISSSHHRTVNPVPTEISAESWFLYRNDHNQEMPTYKGFEL
WQSTTPQHQPEQQQQQQFRHPIYPLQDLYSTAVGLGVGPNQSGFDIFAGDHEASRSGFVM
MRSGGGGISCQDCGNQAKKDCQHMRCRTCCKSRGLQCQTHVKSTWVPAAKRRERQQQLSA
LQQQERHDQLHLDHNNNYKPKRKREDPSASALVCAPLPSNTNGLEVGKFPAKVSSAALFQ
CIQMSSIEDAEDQLAYQAAVNIGGHVFKGILYDQGPESQYNNMAAAGDTSSGGGSGSAGI
PHHHNSAATAIASGGAAAAAEASNFLDPSLFPASLSTFMSTGTQFFPPPRSPR

Transcript Sequence

Gene sequence data has not been registered.